Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847104.1_cds_XP_016509908.1_22803
CDS Infomation

[gene=LOC107827325] [db_xref=GeneID:107827325] [protein=protein SPA1-RELATED 3-like isoform X4] [protein_id=XP_016509908.1] [location=join(134083..134259,134363..134520,135345..136293,136367..136513,136645..136983)] [gbkey=CDS]
Sequence

ATGGTGCAGACTTTGGAAGCTAATAAGAACAGACAAATTGAAGAAAAGAAGCATACTTTT
CCTATGAAACAGATATTGCACTTGGAAACTAATTGGTATAATAGTCCAGAAGAGGTTGAT
GAAGCTCCAAGCACTTGTGCTTCGGACATTTATCGACTCGGAGTCCTTCTCTTTGAGCTA
TTTTGTACCTTCAACTCATCAGATGAGAAAATTGCAACTATGTCATGTTTAAGACATCGT
GTCCTACCCCCACAATTGTTGTTGAAATGGCCTAAAGAAGCTTCATTTTGCTTATGGTTA
TTACACCCGGAACCAAGTAGTCGGCCAAAAATGGGCGAGTTGCTAGAAAGTGAATTCCTT
AGAACTCCAAGACATGACTTAGAAGAACGTGAAGCAGCAATAGAGCTTAGAGAAAAAATA
GATGAGCAGGAAATATTGCTGGAGTTCCTTTTGCTAATCCAACAGCGAAAGCAGGAAGCT
GTGGAAAATTTGCAAGAAATTGTTTCTTTTGTATCGTCTGATATAGAAGAGGCGTCTAAG
ATGCAGACAACCCTTAAGATAAAAGGAGGCTCAAGCTTAGAACGAGCTAAGCGCTTAAAT
TCGCGGAGGACAGATATTACTGAAGATGATGATTCCGGGAGCTCTGGATCTAGAAAGAGA
TTTAGGCTTGGCACAGGAGAGGAATCCGATGGTCATCAAGATGAAAGCCAGAAACCCGAA
AGGCAAATTGAATATAAAGGCAGCATTTTAGCAAAAAGTTCCCGGTTGATGAAGAACTTC
AGAAAATTGGAGACAGCTTATTTCATGACAAGACGCAGGATTGTTAAAACAATGGACAAA
CCTACGAGTAGACGTTGTCAAACAAGTACGGAATGTAGAAGTTCCGGTACAGCTACTGAA
AGGAGTTCTCTGAGTAATTTGTCATCAAAAAGAGGGTGCAAGGAGGATGGAGAGATTGGA
TTTATCAATTCGTACTTAGAGGGTCTGTGCAAGTATTTTTCTTTTAGCAAGTTAGAAGTG
AAGGCAGATTTAAGGCAAGGGGATCTTCTAAACTCATCCAATCTTGTATGTTCTCTCGGT
TTTGATCGTGATGGTGAATTTTTTGCAACTGCCGGCGTAAATAAGAAGATCAAAGTTTTT
GAATATAACTCAATTCTAAATGCGGATCGTGATATACACTATCCAGTCGTTGAAATGGCT
AATAGATCAAAGTTAAGCAGTATATGTTGGAATGGCTATATCAAGAGCCAGCTCGCCTCA
AGTAACTTTGAAGGTGTGGTGCAGGTATGGGATGTCACGAGAAGTCAGCTTTTCATGGAG
ATGAGAGAGCATTTGAAACGCGTCTGGTCTGTTGACTTTTCCGTAGCAGATCCAACCATG
TTGGCGAGCGGGAGCGATGATGGTTCTGTTAAGCTTTGGAATATCAATCAGGGAGTAAGT
GTTGGAACCATAAAAACAAAAGCCAACGTCTGCTGTGTTCAGTTCCCTGTTGATTCTGGT
CGGGCCCTTGCTTTTGGTTCAGCAGATCATAAGATATATTACTATGATCTACGAAACTCA
AAATTGCCGCTATGCACATTAGTTGGGCACAACAAGACAGTGAGCTATGTCAAGTTCATA
GATTCAACAACTCTTGTGTCTGCATCTACGGATAATACGATAAAGCTCTGGGATCTGTCA
TCGTGCACGTCTCGTGTTCTTGATTCTCCTCTTCAGTCATATACCGGTCATATGAATGTA
AAGGTATTGTACTTTGATCCTATCACCTGA

Peptide Sequence

PEP ID

XP_016509908.1
PEP Infomation

PREDICTED: protein SPA1-RELATED 3-like isoform X4 [Nicotiana tabacum]
Sequence

MVQTLEANKNRQIEEKKHTFPMKQILHLETNWYNSPEEVDEAPSTCASDIYRLGVLLFEL
FCTFNSSDEKIATMSCLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMGELLESEFL
RTPRHDLEEREAAIELREKIDEQEILLEFLLLIQQRKQEAVENLQEIVSFVSSDIEEASK
MQTTLKIKGGSSLERAKRLNSRRTDITEDDDSGSSGSRKRFRLGTGEESDGHQDESQKPE
RQIEYKGSILAKSSRLMKNFRKLETAYFMTRRRIVKTMDKPTSRRCQTSTECRSSGTATE
RSSLSNLSSKRGCKEDGEIGFINSYLEGLCKYFSFSKLEVKADLRQGDLLNSSNLVCSLG
FDRDGEFFATAGVNKKIKVFEYNSILNADRDIHYPVVEMANRSKLSSICWNGYIKSQLAS
SNFEGVVQVWDVTRSQLFMEMREHLKRVWSVDFSVADPTMLASGSDDGSVKLWNINQGVS
VGTIKTKANVCCVQFPVDSGRALAFGSADHKIYYYDLRNSKLPLCTLVGHNKTVSYVKFI
DSTTLVSASTDNTIKLWDLSSCTSRVLDSPLQSYTGHMNVKVLYFDPIT

Transcript Sequence

Gene sequence data has not been registered.